Landing Pages#

These pages answer the “what is this?” and “how do I get started?” questions for the R export workflow.

This documentation is intentionally written for mixed audiences:

  • Wet lab / non-technical users: step-by-step “do this, then that” instructions.

  • Computational users: explicit shapes/dtypes, performance considerations, and edge cases.

  • Developers/maintainers: file format details and reproducibility notes.

Recommended reading order

  1. What is cellucid-r?

  2. Quick Start (3 Levels)

  3. Supported Inputs and Workflows

  4. Installation (or earlier if you can’t install)

What is cellucid-r?

What the R package does today, what it doesn’t do yet, and how it fits into the Cellucid ecosystem.

What is cellucid-r?
Quick Start (3 Levels)

Copy/paste: a tiny toy export, a “real dataset” export, and an advanced export with performance options.

Quick Start (3 Levels)
Supported Inputs & Workflows

Exactly what inputs cellucid_prepare() expects (shapes, dtypes, conventions), plus common gotchas.

Supported Inputs and Workflows
Installation

How to install from GitHub, optional dependencies, and installation troubleshooting.

Installation